Questions

• In dockerfile
  • COPY . /submission/ → what are they copying?

Paths and dirs

/mnt/training_data

Should have the folder structure in here:

• train_slice
• validation_slice

<aside> 💡

So in the config.yaml, images_dir should be /mnt/training_data

</aside>

/mnt/training_results

Should have all the results of the training, i.e. the model weights

<aside> 💡

So in config.yaml, model_save_dir should be /mnt/training_results

</aside>

/mnt/query_data

<aside> 💡

We should include in the config.yaml another field with test_dir = /mnt/query_data

</aside>

That folder should contain the test_volume/images

<aside> ⚠️

Maybe we should include an if statement, if test_dir doesn’t contain the test_volume/images, then read it from images_dir (/mnt/training_data)

</aside>

/mnt/predicted_data

Either there we save the images in a subdirectory called test_volume_prediction, or just directly save the volumes there.